CDS

Accession Number TCMCG016C01154
gbkey CDS
Protein Id OMP07526.1
Location complement(join(3845..4081,4301..4402,4729..4926,5312..5437,5542..5823,6363..6533,7052..7213,7867..7930,8067..8452))
Organism Corchorus capsularis
locus_tag CCACVL1_01289

Protein

Length 575aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01004355.1
Definition Aminoacyl-tRNA synthetase, class 1a, anticodon-binding protein [Corchorus capsularis]
Locus_tag CCACVL1_01289

EGGNOG-MAPPER Annotation

COG_category J
Description cysteine--tRNA ligase
KEGG_TC -
KEGG_Module M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R03650        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K01883        [VIEW IN KEGG]
EC 6.1.1.16        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00970        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0000741        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004812        [VIEW IN EMBL-EBI]
GO:0004817        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006423        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0006997        [VIEW IN EMBL-EBI]
GO:0007005        [VIEW IN EMBL-EBI]
GO:0007006        [VIEW IN EMBL-EBI]
GO:0007007        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009559        [VIEW IN EMBL-EBI]
GO:0009561        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010197        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016875        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0042407        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048284        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061024        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGCACTCTTCTCCTAAAGTGCTACAAACCTCTTTTCTCCATTCGATTCTCGTCATTCCCCAACTCGCTCCGCCGGGTTCAACTCGGAACTCACCCTTTCAACAACCCAAAAAGGAGAAATCCAATCCGTCGTTGTTGTTTCAGCTCTTTAGTCCCATCTCAGCCGTTAATCAATGGCCAAACTTTGGACAAAACGGGCGGCAACCGACCGGCTGCGCCTCCGTCAACCGATTTGTGGCTGCACAACACAATGAGTAAAAAGAAGGAATTGTTTAAGCCCAAAACGGAAGGCAAAGTAGGAATGTATGTATGTGGTGTCACCGCATACGATCTCAGCCACATTGGACATGCTCGTGTTTATGTTACTTTTGATGTTCTTTACAGATATCTTAAGCATTTGGGTTATGAAGTTTGTTATGTTCGGAACTTTACCGATGTTGATGACAAGATAATTGCTAGAGCAAATGAATTGAGGGAGGATCCAATCAGTTTAAGCAAACGGTACTGCGATGAGTTCAATCAAGACATGGTGCATCTTCATTGCCTTCCCCCTTCCGTTGAACCTCGTGTCTCAGATCACATGCCTCAGATCATTGACATGATCAAGCAGATTCTTGATAATGAGTATGCATACAGAGTTGAAGGTGATGTTTACTTCTCAGTGGACAAATTTCCGGATTATGGCCGTTTATCTGGGCGGAAATTAGAAGACAATAGAGCTGGTGAGCGTGTTGCTGTGGACTCAAGGAAGAGAAATCCAGCTGATTTTGCTTTATGGAAGTCCGCAAAAGAAGGGGAGCCTTTTTGGGAGAGTCCATGGGGGCCTGGAAGACCTGGATGGCATATTGAGTGCAGTGCCATGAGTGCTGCTTATTTGGGGCACTCTTTTGATATACATGGCGGAGGGATGGACCTTGTATTTCCTCACCATGAAAATGAAATTGCTCAAAGTTGTGCTGCGTGTAAACAGAGCAATATTAGCTACTGGATACACAATGGCTTCGTCACTGTTGACTCTGAGAAAATGTCCAAATCCCTTGGAAACTTCTTCACAATTAGGCAGGTTATAGATCTTTATCATCCACTGGCTTTAAGACTTTTTTTAATGGGCACCCATTATCGATCTCCAATCAACTATTCTGATGTACTACTTGAAAGTGCTTCGGAACGACTTTTCTACATCTATCAGACACTGCATGACTGTGAAAATATTCTGAGCCAGCATGATGTGCTTGAGGAGTCCATTCCACCTGACACTACAAGTATCATCAACAAGTTCCAAAATGAATTTTTGGTTTCCATGTCTGATGATCTCCACACTCCAGTTGTTTTGGCTGCATTATCTGACCCATTGAAGACAATAAATGATCTGCTACATACTCGTCAGGGGAAGAAGCAAAAAATGCGCATAGAGTCAGTGGCTGCTCTTGAAAAGATAATTAGGAATGTTCTCAGTGTCTTGGGCCTGATGCCCACAAGTTACTCCGAGGCACTAAAGCAGCTGAGAGAAGTGGCATTGAAGCGGGCAAAGTTAACAGAAGACCAAATCTTGCAAAAAATTGAGGAAAGAACTGAGGCAAGAAAGAACAAAGACTATGAAAAGTCAGATGCAATTAGAAAAGATTTAGCTTCGGTAGGGATCGCTCTTATGGACTCTCCAAATGGCACAAGTTGGAGGCCAGCAATTCCTCTTGCACTTCAAGAGCACCCCGTGGCTGCAACCTGA
Protein:  
MGTLLLKCYKPLFSIRFSSFPNSLRRVQLGTHPFNNPKRRNPIRRCCFSSLVPSQPLINGQTLDKTGGNRPAAPPSTDLWLHNTMSKKKELFKPKTEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRYLKHLGYEVCYVRNFTDVDDKIIARANELREDPISLSKRYCDEFNQDMVHLHCLPPSVEPRVSDHMPQIIDMIKQILDNEYAYRVEGDVYFSVDKFPDYGRLSGRKLEDNRAGERVAVDSRKRNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACKQSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLMGTHYRSPINYSDVLLESASERLFYIYQTLHDCENILSQHDVLEESIPPDTTSIINKFQNEFLVSMSDDLHTPVVLAALSDPLKTINDLLHTRQGKKQKMRIESVAALEKIIRNVLSVLGLMPTSYSEALKQLREVALKRAKLTEDQILQKIEERTEARKNKDYEKSDAIRKDLASVGIALMDSPNGTSWRPAIPLALQEHPVAAT